University of Alberta的Stothard Research Group主页上有一些很好的生物信息学程序和脚本,如:……【阅读全文】
Tag Archives: Perl
[荐] 《Beginning Perl》 and “Understand References Today”
- 免费的Perl入门书籍:《Beginning Perl》,可以在线阅读,同时提供下载。
- Reference(参考,指针)入门短文:Understand References Today (You only need to know 10% of what’s in the manual to get 90% of the benefit. This article is going to show you that 10%. )
- Learn Perl: A Tutorial to Get You Started 。(20150820添加)
生成特定碱基比例的随机序列
无需解压就可查看压缩包内文本文件的内容
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组合使用zcat和head(或tail)[依赖于Linux系统]
748e5e14f7f17309d0d1dc328b854f00003……【阅读全文】
[更新]seqTools v3.0
关于seqTools v1.0的详细信息可以参看:对FASTA格式的简单处理与统计
关于seqTools v2.0的详细信息可以参看:[更新]seqTools v2.0……【阅读全文】
一些关于Linux的书籍
有网友整理集合了一些关于Linux的书籍,欲知详情,请移步至http://ebook.elain.org/……【阅读全文】
在Perl中高效sort——Guttman-Rosler转换(GRT)
The Guttman-Rosler Transform is a technique from Uri Guttman and Larry Rosler for improving sort speed in perl.……【阅读全文】
在Perl中高效sort——Schwartzian变换
In computer science, the Schwartzian transform is a Perl programming idiom used to improve the efficiency of sorting a list of items. This idiom is appropriate for comparison-based sorting when the ordering is actually based on the ordering of a certain property (the key) of the elements, where computing that property is an intensive operation that should be performed a minimal number of times. The Schwartzian Transform is notable in that it does not use named temporary arrays.……【阅读全文】
在Perl中高效sort——Orcish算法
The Orcish Maneuver (invented by Joseph N. Hall [8]) eliminates the preprocessing pass over the data, which might save keeping a copy of the data if they are being read directly from a file. It does the sortkey extraction only once per record, as it checks the hash to see if it was done before. The test and storage of the sortkey is done with the ||= operator (short-circuit or-assignment), which will evaluate and assign the expression on the right to the lvalue on the left, if the lvalue is false. The name “orcish” is a pun on “or-cache”. The full statement in the sortsub looks like this:……【阅读全文】
从文本文件中随机提取数行的代码
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代码一
748e5e14f7f17309d0d1dc328b854f00011……【阅读全文】