12月 07

[荐]Intermediate R/Bioconductor for High-Throughput Sequence Analysis

Intermediate R/Bioconductor for High-Throughput Sequence Analysis introduces users with some R experience to common Bioconductor work flows for sequence analysis. The course involves a combination of presentations and hands-on exercises. Our starting point is BAM files created by aligning short reads to a reference genome. Topics include exploratory analysis (GenomicRanges, Rsamtools); assessing differential expression of known genes (DESeq); detection, calling, and manipulation of variants (VariantTools, VariantAnnotation). We learn how to integrate results with curated gene and genomic annotations (GenomicFeatures), and to visualize results (GViz, ggbio).……【阅读全文】

11月 19

[荐]第二代测序技术数据分析教程与视频

在线教程(Fall 2012 – Analyzing High Throughput Sequencing Data):http://www.personal.psu.edu/iua1/pages/fall-2012-bmmb-597D.html
在线视频(新一代测序技术数据分析[英语]):http://www.youku.com/playlist_show/id_17418799_ascending_1_mode_pic_page_1.html……【阅读全文】