Analyzing ’omics data using hierarchical models
How does DNA sequence motif discovery work
How does eukaryotic gene prediction work
How does gene expression clustering work
How does multiple testing correction work
How do RNA folding algorithms work
How do shotgun proteomics algorithms identify proteins
How to map billions of short reads onto genomes
How to visually interpret biological data using networks
Inference in Bayesian networks
Maximizing power in association studies
SNP imputation in association studies
Understanding genome browsing
What are artificial neural networks
What are decision trees
What are DNA sequence motifs
What is a hidden Markov model
What is a support vector machine
What is Bayesian statistics
What is dynamic programming
What is flux balance analysis
What is principal component analysis
What is the expectation maximization algorithm
Where did the BLOSUM62 alignment score matrix come from

Getting Started in Biological Pathway Construction and Analysis
Getting Started in Computational Immunology
Getting Started in Computational Mass Spectrometry–Based Proteomics
Getting Started in Gene Expression Microarray Analysis
Getting Started in Gene Orthology and Functional Analysis
Getting Started in Probabilistic Graphical Models
Getting Started in Structural Phylogenomics
Getting Started in Text Mining: Part Two
Getting Started in Text Mining
Getting Started in Tiling Microarray Analysis
On the Process of Becoming a Great Scientist