Great data visualization starts with great ideas and design but only materializes with the right tools. Here is a list of software I have used to produce figures and what I think their best features are.……【阅读全文】
Tag Archives: 可视化
[荐]box plots与BoxPlotR
box plots
- Bring on the box plots
- Points of View: Bar charts and box plots
- Points of Significance: Visualizing samples with box plots
- Box plot(wikipedia)
- 40 years of boxplots
- Methods for Presenting Statistical Information: The Box Plot
- Beanplot: A Boxplot Alternative for Visual Comparison of Distributions
BoxPlotR
This application allows users to generate customized box plots in a number of variants based on their data. A data matrix can be uploaded as a file or pasted into the application. Basic box plots are generated based on the data and can be modified to include additional information. Additional features become available when checking that option. Information about sample sizes can be represented by the width of each box where the widths are proportional to the square roots of the number of observations n. Notches can be added to the boxes. These are defined as +/-1.58*IQR/sqrt(n) which gives roughly 95% confidence that two medians are different. It is also possible to define the whiskers based on the ideas of Spear and Tukey. Additional options of data visualization (violin and bean plots) reveal more information about the underlying data distribution. Plots can be labeled, customized (colors, dimensions, orientation) and exported as eps, pdf and svg files.……【阅读全文】
Gource:可视化版本控制
Gource将整个项目代码当作一个树来呈现,将代码提交、分支及贡献者等信息以可视化的方式表现出来。内置对Git,Mercurial,Bazaar和SVN等版本控制系统的支持。……【阅读全文】
[文献专题]Next Generation Sequencing Visualization
Briefings in Bioinformatics (Volume 14 Issue 2 March 2013), Special Issue: Next Generation Sequencing Visualization:……【阅读全文】